PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678431360
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 525aa    MW: 56892.9 Da    PI: 6.8457
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678431360genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.71e-34139248289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasnsssg 88 
                +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++             + +++++ce+e++++ +++++ +
  678431360 139 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDELAQLppwhptsqnvnfeQDEAQKKCEEEQQQQPQQQQKLS 238
                79**************************************************************666655555544333333444333333333333333 PP

        TCP  89 .........k 89 
                         +
  678431360 239 vhhgelmisS 248
                4444444431 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.6E-31139253IPR005333Transcription factor, TCP
PROSITE profilePS5136932.979141199IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MPPSPPLSLG LLIAHTHTHS SSNCHLPLPD HLPEGSHAAP PVQLKAPISM AYMEVKLDPE  60
SNLHQGQNQF LTGEDGREPA SPPKKKASYF SPAVTTPEYA KLRQNMGESS NHHTAPPPSR  120
LGPRSEIVEV QGGHIVRSTG RKDRHSKVCT AKGPRDRRVR LAAHTAIQFY DVQDRLGYDR  180
PSKAVDWLIK KAKNAIDELA QLPPWHPTSQ NVNFEQDEAQ KKCEEEQQQQ PQQQQKLSVH  240
HGELMISSAS SKRPMMMLGG EDEMHNNPSS QNSSFLPSSL DSDAIADTIK SFFPMGASAE  300
ASSSSMQFQS FQASDLLSGN SGNSQDLRLS LQSFQDPMLL HRQPSEQAHQ QGQSLMGFDA  360
ASNWAEHHQQ AVAAAAAAAE LSRFQRLTAW NPGGGDSNNG NGGAAAGFLF NSQQPTLQQL  420
LGHTHFSSQR GPLQSSNTPS VRAWMDQSGV AAAIASSDPS QHQQQHHHLL PTVVPIYPSS  480
MQGIGFASGA GGFSGFPIPA RIHGDVEEHD GYSDKPSSVS SDSRH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082737.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_011082738.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR54e-92TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A0M5L3G71e-164A0A0M5L3G7_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000397861e-131(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32072349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-49TCP family protein